CRUKCI Cluster Transition - Hands-on training sessions

5 hands-on training sessions for using the cluster to run analysis @ CRUKCI for complete novice.

What do you need?

• A computer (ideally a Unix-like one) connected to the Internet
• A cluster account – request one via Helpdesk - IT ithelpdesk@cruk.cam.ac.uk
• A text editor – download Atom if you do not have one already
• A web browser to access this page

and the ability to submit jobs onto the cluster, please check if you can by following instructions on Can I submit jobs onto the cluster? before doing sessions 3, 4 & 5.

Where to start?

• Session 1: Shell
• Session 2: Cluster
• Session 3: Usage of the cluster
• Session 4: Analysis steps by steps
• Session 5: Advanced analysis and downstream analysis in R

Tiny url of this page

• https://frama.link/crukci-cluster-web

Course materiels is accessible: https://frama.link/crukci-cluster

Rendering GitHub markdown files locally

https://github.com/joeyespo/grip

python3 -m venv venv
source venv/bin/activate
pip install grip
grip session1-shell.md